Illumina amplicon sequencing of metagenomic paired-end library 'Solex... - SRA

SRX468558: Illumina amplicon sequencing of metagenomic paired-end library 'Solexa-217708' containing sample 'M23D10' from individual 'RAG TB Infected Mouse 3 Day 10'
1 ILLUMINA (Illumina MiSeq) run: 80,345 spots, 28.1M bases, 17.7Mb downloads

UUID: 4fb74e5d-a824-4eeb-be8b-c2378edc8d0d

Design: Illumina sequencing of Mycobacterium tuberculosis M23D10 via polymerase chain reaction

Submitted by: Broad Institute (BI)

Study: TB-ARC - Microbiome

PRJNA219721 • SRP032325 • All experiments • All runs

Sample:

SAMN02584465 • SRS555713 • All experiments • All runs

Organism: Mycobacterium tuberculosis M23D10

Library:

Name: Solexa-217708

Instrument: Illumina MiSeq

Strategy: AMPLICON

Source: METAGENOMIC

Selection: PCR

Layout: PAIRED

Spot descriptor:

1 forward176 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithoutReference

data_type: 16S

gssr_id: 482284.0

library_type: 16S

lsid: broadinstitute.org:bsp.prod.sample:5FI15

material_type: DNA:DNA Somatic

product_order: PDO-2860

product_part_number: P-MCV-0002

project: G58821

research_project: RP-114

root_sample_id: SM-55CQR

sample_id: SM-5FI15

work_request: 40090

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-07 21:05:23.0	GAPipeline	RTA1.18.42	Sequencer Application 2.3.0.3

Runs: 1 run, 80,345 spots, 28.1M bases, 17.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1166263	80,345	28.1M	17.7Mb	2014-02-10

ID:: 648746

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